At what stage in the process? If you are building CCAs for brassboard prototypes or the final CCA design is still in flux, quality manufacturing is probably a waste of money as you are likely to end up modifying the design and blue-wiring the board anyway. Nobody, including the company, is remotely suggesting that Dirty PCBs is an option for production boards.
I've had good results with OSH Park and 10mil trace / ground plane isolation, FWIW - and they take Eagle 6.5 natively (although depending on third-party library setup you'll probably want gerbers anyway).
In my environment it's pretty easy to answer that question.