Yes. I hadn't heard the term tree of life inheritance, but that is the heart of the problem. I think this could be somewhat mitigated by banning access to non-abstract parent methods and all grandparent methods (as well as all relations that aren't directly reachable by going up the tree). But at that point you might as well just use composition anyway.
By banning access to GreatGrandparent's getCancerChancePercent(); method, I won't know what the starting chance was, which will make it harder to determine nature vs. nurture. Isn't that what ancestry and genome mapping is doing? Going back up the tree?
