> Native oxide is stripped off the wafer with a quick dilute HF dip and then they are extensively cleaned in Piranha solution (H2SO4:H2O2), RCA 1 (H2O:NH3:H2O2), RCA 2 (H2O:HCL:H2O2), followed by another dilute HF dip.
Fascinating project, but I'm not going to try this one at home
Oh goodness, this is the kind of thing I've been trying to find for years now: some method of making a computer from scratch, as in from raw materials.
The Great Tinkertoy Computer [1] is made from raw materials, although its specific rather than a general purpose computer, and had computer aided design although back in the day it was via a PDP-10.