That's not the same administration. It's perhaps an issue that could have also happened in many other states in the US, but the comment was about the Trump administration.
That's really about timing. If it was earlier in his administration then leadership within the CDC, FDA, etc wouldn't have avoided blunter disagreement with chloroquine enema man. As it is they risked a major public safety crisis to keep their jobs, perhaps on the theory that whoever he would hire to replace them would be an active safety threat.