I never used a system with flatpak, but when I read sandboxed I expect the maximum permission to be read-only access to my home directory or something like android where it asks for additional permissions.
Read only is already giving the keys to the kingdom if internet connections are not limited. Any sandboxing that doesn't protect against exfiltrating private documents is not sandboxing at all.
It's fine if it's a trade off between usability and security but then they shouldn't call it sandboxing or make it very clear that that's the trade off.