This is why I covered my existing procedure "wounds" with loads of vaseline and securely bandaged them, before I went in for another, longer, procedure. The nurses and doctors were completely understanding and made sure to tell anyone involved, which was good to hear.
Of course, I'm not sure how effective that sort of prep would be, but I hope I reduced my risk, at least.
It's a different issue. You can't autoclave your spaceship for example. Or use the same substances they use, though you might be able to use other ones
Especially since no hospital would rely on just ethanol and isopropyl. You'd think they'd at least try to live up to the standards of a hospital.