Yeah this article is very confusing. I said it in an earlier comment, it wouldn't surprise me if another government agency (DoD, NSA, CIA) saw what SpaceX is doing, saw they didn't have a license, and got NOAA in trouble, and now they are trying to do their due diligence and got caught in a cross fire.
That's an interesting viewpoint and maybe explains some of the weirdness around this whole affair.
Even so, it is hard for me to imagine what DoD, NSA or CIA might have in terms of reasons why low resolution video transmission from space would be problematic, especially since for other launches the 'from orbit' videos are not deemed a problem and from where I'm sitting they are functionally identical and potentially more problematic (because they are government launches).