Yes! Graphs have many interesting algebraic properties.
I'm not aware of articles treating graphs as Kleene algebras (I haven't looked for them though). Conway's "Regular Algebra and Finite Machines" [1] and Kozen's "A Completeness Theorem for Kleene Algebras and the Algebra of Regular Events" [2] are interesting texts to read on Kleene algebra.
solidangle: Indeed, there are a lot of graph algebras out there, and I looked at many of them, including the Kleene Algebras. So far I haven't found any algebra with the decomposition axiom, but if you come across one, please let me know!
Why do I need the decomposition axiom? I haven't actually provided a motivation for it (or why I defined overlay and connect the way I did). So, here it is: just like LolWolf, I wanted to represent arbitrary graphs and only graphs using expressions, so expression x -> y -> z should be just a graph, and therefore I should be able to construct it from smaller pieces. But what should these pieces be? We can't make it equal to x -> y + y -> z because then our definition of -> would be partial, since it's not always possible to find 'the last node' (in this case y) that we need to connect to z (e.g. the left-hand side may be a cycle). The only choice that seems to work is to connect all vertices on the left-hand side to all vertices on the right hand side, which leads directly to the decomposition axiom.
I'm not aware of articles treating graphs as Kleene algebras (I haven't looked for them though). Conway's "Regular Algebra and Finite Machines" [1] and Kozen's "A Completeness Theorem for Kleene Algebras and the Algebra of Regular Events" [2] are interesting texts to read on Kleene algebra.
[1] https://www.amazon.com/Regular-Algebra-Finite-Machines-Mathe...
[2] https://www.cs.cornell.edu/~kozen/papers/ka.pdf